Prof. dr. H.J. (Huib) Bakker
Ultrafast Spectroscopy of Molecules in the Condensed Phase
Faculty of Science
Van 't Hoff Institute for Molecular Sciences
Visiting address
- Science Park 904
- Room number: D1.165
Postal address
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Postbus 94157
1090 GD Amsterdam
Contact details
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Publications
2022
Korotkevich, A. A., Sofronov, O. O., Lugier, O., Sengupta, S., Tanase, S., & Bakker, H. J. (2022). Direct Probing of Vibrational Interactions in UiO-66 Polycrystalline Membranes with Femtosecond Two-Dimensional Infrared Spectroscopy. Journal of Physical Chemistry Letters, 13(42), 9793-9800. https://doi.org/10.1021/acs.jpclett.2c02509 [details]
2021
- Cota, R., Woutersen, S., & Bakker, H. J. (2021). Accelerated Vibrational Energy Relaxation of Water in Alkaline Environments. Journal of Physical Chemistry B, 125(43), 11980-11986. https://doi.org/10.1021/acs.jpcb.1c02730 [details]
- Giubertoni, G., Pérez de Alba Ortíz, A., Bano, F., Zhang, X., Linhardt, R. J., Green, D. E., DeAngelis, P. L., Koenderink, G. H., Richter, R. P., Ensing, B., & Bakker, H. J. (2021). Strong Reduction of the Chain Rigidity of Hyaluronan by Selective Binding of Ca2+ Ions. Macromolecules, 54(3), 1137-1146. https://doi.org/10.1021/acs.macromol.0c02242 [details]
- Moll, C. J., Giubertoni, G., van Buren, L., Versluis, J., Koenderink, G. H., & Bakker, H. J. (2021). Molecular Structure and Surface Accumulation Dynamics of Hyaluronan at the Water-Air Interface. Macromolecules, 54(18), 8655-8663. https://doi.org/10.1021/acs.macromol.1c00366 [details]
- Van Dam, E. P., Gouzy, R., Pelan, E., Velikov, K. P., & Bakker, H. J. (2021). Water reorientation dynamics in colloidal water-oil emulsions. Physical Chemistry Chemical Physics, 23(47), 27024-27030. https://doi.org/10.1039/d1cp03182a [details]
2020
- Cota, R., Tiwari, A., Ensing, B., Bakker, H. J., & Woutersen, S. (2020). Hydration interactions beyond the first solvation shell in aqueous phenolate solution. Physical Chemistry Chemical Physics, 22(35), 19940-19947. https://doi.org/10.1039/d0cp01209b [details]
- Cota, R., van Dam, E. P., Woutersen, S., & Bakker, H. J. (2020). Slowing Down of the Molecular Reorientation of Water in Concentrated Alkaline Solutions. Journal of Physical Chemistry B, 124(38), 8309-8316. https://doi.org/10.1021/acs.jpcb.0c03614 [details]
- Sofronov, O. O., Giubertoni, G., Pérez de Alba Ortiz, A., Ensing, B., & Bakker, H. J. (2020). Peptide Side-COOH Groups Have Two Distinct Conformations under Biorelevant Conditions. Journal of Physical Chemistry Letters, 11(9), 3466-3472. https://doi.org/10.1021/acs.jpclett.0c00711 [details]
2019
- Smit, W. J., van Dam, E. P., Cota, R., & Bakker, H. J. (2019). Caffeine and taurine slow down water molecules. Journal of Physics Communications, 3(2), Article 025010. https://doi.org/10.1088/2399-6528/ab07e4 [details]
2018
- Brotzakis, Z. F., Voets, I. K., Bakker, H. J., & Bolhuis, P. G. (2018). Water structure and dynamics in the hydration layer of a type III anti-freeze protein. Physical Chemistry Chemical Physics, 20(10), 6996-7006. https://doi.org/10.1039/c8cp00170g [details]
- Cota, R., Ottosson, N., Bakker, H. J., & Woutersen, S. (2018). Evidence for Reduced Hydrogen-Bond Cooperativity in Ionic Solvation Shells from Isotope-Dependent Dielectric Relaxation. Physical Review Letters, 120(21), Article 216001. https://doi.org/10.1103/PhysRevLett.120.216001 [details]
- Weber, B., Nagata, Y., Ketzetzi, S., Tang, F., Smit, W. J., Bakker, H. J., Backus, E. H. G., Bonn, M., & Bonn, D. (2018). Molecular Insight into the Slipperiness of Ice. Journal of Physical Chemistry Letters, 9(11), 2838-2842. https://doi.org/10.1021/acs.jpclett.8b01188 [details]
2017
- Meister, K., Roeters, S. J., Paananen, A., Woutersen, S., Versluis, J., Szilvay, G. R., & Bakker, H. J. (2017). Observation of pH-Induced Protein Reorientation at the Water Surface. The Journal of Physical Chemistry Letters, 8(8), 1772-1776. https://doi.org/10.1021/acs.jpclett.7b00394 [details]
- van der Loop, T. H., Ottosson, N., Vad, T., Sager, W. F. C., Bakker, H. J., & Woutersen, S. (2017). Communication: Slow proton-charge diffusion in nanoconfined water. Journal of Chemical Physics, 146(13), Article 131101. https://doi.org/10.1063/1.4979714 [details]
2016
- Brotzakis, Z. F., Groot, C. C. M., Brandeburgo, W. H., Bakker, H. J., & Bolhuis, P. G. (2016). Dynamics of Hydration Water around Native and Misfolded α-Lactalbumin. The journal of Physical Chemistry. B, 120(21), 4756-4766. https://doi.org/10.1021/acs.jpcb.6b02592 [details]
- Groot, C. C. M., Velikov, K. P., & Bakker, H. J. (2016). Structure and dynamics of water molecules confined in triglyceride oils. Physical Chemistry Chemical Physics, 18(42), 29361-29368. https://doi.org/10.1039/c6cp05883c [details]
- van der Post, S. T., Woutersen, S., & Bakker, H. J. (2016). Quantum Interference in the Vibrational Relaxation of the O-H Stretch Overtone of Liquid H2O. The Journal of Physical Chemistry. A, 120(20), 3441-3449. https://doi.org/10.1021/acs.jpca.5b11735
2015
- Rabouw, F. T., Vaxenburg, R., Bakulin, A. A., van Dijk-Moes, R. J. A., Bakker, H. J., Rodina, A., Lifshitz, E., Efros, A. L., Koenderink, A. F., & Vanmaekelbergh, D. (2015). Dynamics of Intraband and Interband Auger Processes in Colloidal Core-Shell Qauntum Dots. ACS Nano, 9(10), 10366-10376. https://doi.org/10.1021/acsnano.5b04491 [details]
2014
- van der Loop, T. H., Ottosson, N., Lotze, S., Kentzinger, E., Vad, T., Sager, W. F. C., Bakker, H. J., & Woutersen, S. (2014). Structure and dynamics of water in nanoscopic spheres and tubes. Journal of Chemical Physics, 141(18), 18C535. https://doi.org/10.1063/1.4898380 [details]
2012
- van der Loop, T. H., Panman, M. R., Lotze, S., Zhang, J., Vad, T., Bakker, H. J., Sager, W. F. C., & Woutersen, S. (2012). Structure and dynamics of water in nonionic reverse micelles: A combined time-resolved infrared and small angle x-ray scattering study. Journal of Chemical Physics, 137(4), 044503. https://doi.org/10.1063/1.4736562 [details]
2011
- Bakulin, A. A., Pshenichnikov, M. S., Bakker, H. J., & Petersen, C. (2011). Hydrophobic molecules slow down the hydrogen-bond dynamics of water. The Journal of Physical Chemistry. A, 115(10), 1821-1829. https://doi.org/10.1021/jp107881j [details]
- Garcia-Araez, N., Rodriguez, P., Navarro, V., Bakker, H. J., & Koper, M. T. M. (2011). Structural effects on water adsorption on gold electrodes. The Journal of Physical Chemistry. C, 115(43), 21249-21257. https://doi.org/10.1021/jp206539a [details]
- Tielrooij, K. J., van der Post, S. T., Hunger, J., Bonn, M., & Bakker, H. J. (2011). Anisotropic water reorientation around ions. The journal of Physical Chemistry. B, 115(43), 12638-12647. https://doi.org/10.1021/jp206320f [details]
- Zhang, Z., Piatkowski, L., Bakker, H. J., & Bonn, M. (2011). Communication: interfacial water structure revealed by ultrafast two-dimensional surface vibrational spectroscopy. Journal of Chemical Physics, 135(2), 021101-021101. https://doi.org/10.1063/1.3605657 [details]
- Zhang, Z., Piatkowski, L., Bakker, H. J., & Bonn, M. (2011). Ultrafast vibrational energy transfer at the water/air interface revealed by two-dimensional surface vibrational spectroscopy. Nature Chemistry, 3(11), 888-893. https://doi.org/10.1038/NCHEM.1158 [details]
2010
- Bakker, H. J., & Skinner, J. L. (2010). Vibrational spectroscopy as a probe of structure and dynamics in liquid water. Chemical Reviews, 110(3), 1498-1517. https://doi.org/10.1021/cr9001879 [details]
- Bonn, M., Bakker, H. J., Ghosh, A., Yamamoto, S., Sovago, M., & Campen, R. K. (2010). Structural inhomogeneity of interfacial water at lipid monolayers revealed by surface-specific vibrational pump-probe spectroscopy. Journal of the American Chemical Society, 132(42), 14971-14978. https://doi.org/10.1021/ja106194u [details]
- Cox, M. J., & Bakker, H. J. (2010). Femtosecond study of the deuteron-transfer dynamics of naphtol salts in water. The Journal of Physical Chemistry. A, 114(39), 10523-10530. https://doi.org/10.1021/jp105506a [details]
- Paesani, F., Yoo, S., Bakker, H. J., & Xantheas, S. S. (2010). Nuclear Quantum Effects in the Reorientation of Water. The Journal of Physical Chemistry Letters, 1(15), 2316-2321. https://doi.org/10.1021/jz100734w [details]
- Petersen, C., Bakulin, A. A., Pavelyev, V. G., Pshenichnikov, M. S., & Bakker, H. J. (2010). Femtosecond midinfrared study of aggregation behavior in aqueous solutions of amphiphilic molecules. Journal of Chemical Physics, 133(16), 164514. https://doi.org/10.1063/1.3493461 [details]
- Piatkowski, L., & Bakker, H. J. (2010). Vibrational relaxation pathways of AI and AII modes in N-methylacetamide clusters. The Journal of Physical Chemistry. A, 114(43), 11462-11470. https://doi.org/10.1021/jp107590b [details]
- Tielrooij, K. J., Garcia-Araez, N., Bonn, M., & Bakker, H. J. (2010). Cooperativity in ion hydration. Science, 328(5981), 1006-1009. https://doi.org/10.1126/science.1183512 [details]
- Tielrooij, K. J., Hunger, J., Buchner, R., Bonn, M., & Bakker, H. J. (2010). Influence of concentration and temperature on the dynamics of water in the hydrophobic hydration shell of tetramethylurea. Journal of the American Chemical Society, 132(44), 15671-15678. https://doi.org/10.1021/ja106273w [details]
- Timmer, R. L. A., & Bakker, H. J. (2010). Vibrational Förster transfer in ice Ih. The Journal of Physical Chemistry. A, 114(12), 4148-4155. https://doi.org/10.1021/jp911726s [details]
- Timmer, R. L. A., Cox, M. J., & Bakker, H. J. (2010). Direct observation of proton transfer in ice Ih using femtosecond spectroscopy. The Journal of Physical Chemistry. A, 114(5), 2091-2101. https://doi.org/10.1021/jp908561h [details]
- Timmer, R. L. A., Tielrooij, K. J., & Bakker, H. J. (2010). Vibrational Förster transfer to hydrated protons. Journal of Chemical Physics, 132(19), 194504. https://doi.org/10.1063/1.3432616 [details]
2009
- Bakker, H. J. (2009). Water dynamics: Ion-ing out the details. Nature Chemistry, 1(1), 24-25. https://doi.org/10.1038/nchem.154 [details]
- Bakulin, A. A., Liang, C., La Cour Jansen, T., Wiersma, D. A., Bakker, H. J., & Pshenichnikov, M. S. (2009). Hydrophobic solvation: A 2D IR spectroscopic inquest. Accounts of Chemical Research, 42(9), 1229-1238. https://doi.org/10.1021/ar9000247 [details]
- Bonn, M., Bakker, H. J., Rago, G., Pouzy, F., Siekierzycka, J. R., Brouwer, A. M., & Bonn, D. (2009). Suppression of proton mobility by hydrophobic hydration. Journal of the American Chemical Society, 131(47), 17070-17070. https://doi.org/10.1021/ja9083094 [details]
- Cox, M. J., Siwick, B. J., & Bakker, H. J. (2009). Influence of ions on aqueous acid-base reactions. ChemPhysChem, 10(1), 236-244. https://doi.org/10.1002/cphc.200800406 [details]
- Cox, M. J., Timmer, R. L. A., Bakker, H. J., Park, S., & Agmon, N. (2009). Distance-dependent proton transfer along water wires connecting acid-base pairs. The Journal of Physical Chemistry. A, 113(24), 6599-6606. https://doi.org/10.1021/jp9004778 [details]
- Paparo, D., Tielrooij, K. J., Bakker, H. J., & Bonn, M. (2009). Terahertz dielectric relaxation of biological water confined in model membranes made of lyotropic phospholipids. Molecular Crystals and Liquid Crystals Science, 500, 108-117. https://doi.org/10.1080/15421400802713769 [details]
- Petersen, C., Tielrooij, K. J., & Bakker, H. J. (2009). Strong temperature dependence of water reorientation in hydrophobic hydration shells. Journal of Chemical Physics, 130(21), 214511. https://doi.org/10.1063/1.3142861 [details]
- Piatkowski, L., Eisenthal, K. B., & Bakker, H. J. (2009). Ultrafast intermolecular energy transfer in heavy water. Physical Chemistry Chemical Physics, 11(40), 9033-9038. https://doi.org/10.1039/b908975f [details]
- Rezus, Y. L. A., & Bakker, H. J. (2009). Destabilization of the hydrogen-bond structure of water by the osmolyte trimethylamine N-oxide. The journal of Physical Chemistry. B, 113(13), 4038-4044. https://doi.org/10.1021/jp805458p [details]
- Sovago, M., Kramer Campen, R., Bakker, H. J., & Bonn, M. (2009). Hydrogen bonding strength of interfacial water determined with surface sum-frequency generation. Chemical Physics Letters, 470(1-3), 7-12. https://doi.org/10.1016/j.cplett.2009.01.009 [details]
- Tielrooij, K. J., Cox, M. J., & Bakker, H. J. (2009). Effect of confinement on proton-transfer reactions in water nanopools. ChemPhysChem, 10(1), 245-251. https://doi.org/10.1002/cphc.200800541 [details]
- Tielrooij, K. J., Paparo, D., Piatkowski, L., Bakker, H. J., & Bonn, M. (2009). Dielectric relaxation dynamics of water in model membranes probed by terahertz spectroscopy. Biophysical Journal, 97(9), 2484-2492. https://doi.org/10.1016/j.bpj.2009.08.024 [details]
- Tielrooij, K. J., Petersen, C., Rezus, Y. L. A., & Bakker, H. J. (2009). Reorientation of HDO in liquid H2O at different temperatures: Comparison of first and second order correlation functions. Chemical Physics Letters, 471(1-3), 71-74. https://doi.org/10.1016/j.cplett.2009.02.003 [details]
- Tielrooij, K. J., Timmer, R. L. A., Bakker, H. J., & Bonn, M. (2009). Structure dynamics of the proton in liquid water probed with terahertz time-domain spectroscopy. Physical Review Letters, 102(19), 198303. https://doi.org/10.1103/PhysRevLett.102.198303 [details]
- Timmer, R. L. A., & Bakker, H. J. (2009). Hydrogen bond fluctuations of the hydration shell of the bromide anion. The Journal of Physical Chemistry. A, 113(21), 6104-6110. https://doi.org/10.1021/jp902424u [details]
2008
- Bakker, H. J. (2008). Structural dynamics of aqueous salt solutions. Chemical Reviews, 108(4), 1456-1473. https://doi.org/10.1021/cr0206622 [details]
- Bakker, H. J., Rezus, Y. L. A., & Timmer, R. L. A. (2008). Molecular reorientation of liquid water studied with femtosecond midinfrared spectroscopy. The Journal of Physical Chemistry. A, 112(46), 11523-11534. https://doi.org/10.1021/jp8012943 [details]
- Cox, M. J., & Bakker, H. J. (2008). Parallel proton transfer pathways in aqueous acid-base reactions. Journal of Chemical Physics, 128(17), 174501. https://doi.org/10.1063/1.2889390 [details]
- Dokter, A. M., & Bakker, H. J. (2008). Transient absorption of vibrationally excited ice Ih. Journal of Chemical Physics, 128(2), Article 024502. https://doi.org/10.1063/1.2820765 [details]
- Dokter, A. M., Petersen, C., Woutersen, S., & Bakker, H. J. (2008). Vibrational dynamics of ice in reverse micelles. Journal of Chemical Physics, 128(4), 044509. https://doi.org/10.1063/1.2826376 [details]
- Nienhuys, H. K., & Bakker, H. J. (2008). Noncollinear optical parametric amplification in potassium titanyl phosphate pumped at 800 nm. Applied Optics, 47(15), 2870-2873. https://doi.org/10.1364/AO.47.002870 [details]
- Rezus, Y. L. A., & Bakker, H. J. (2008). Femtosecond spectroscopic study of the solvation of amphiphilic molecules by water. Chemical Physics, 350(1-3), 87-93. https://doi.org/10.1016/j.chemphys.2008.01.008 [details]
- Rezus, Y. L. A., & Bakker, H. J. (2008). Strong slowing down of water reorientation in mixtures of water and tetramethylurea. The Journal of Physical Chemistry. A, 112(11), 2355-2361. https://doi.org/10.1021/jp077135c [details]
- Siwick, B. J., Cox, M. J., & Bakker, H. J. (2008). Long-range proton transfer in aqueous acid-base reactions. The journal of Physical Chemistry. B, 112(2), 378-389. https://doi.org/10.1021/jp075663i [details]
- Sovago, M., Kramer Campen, R., Wurpel, G. W. H., Müller, M., Bakker, H. J., & Bonn, M. (2008). Reply [to 'Comment on "Vibrational response of hydrogen-bonded interfacial water is dominated by intramolecular coupling"']. Physical Review Letters, 101(13), 139402. https://doi.org/10.1103/PhysRevLett.101.139402 [details]
- Sovago, M., Kramer Campen, R., Wurpel, G. W. H., Müller, M., Bakker, H. J., & Bonn, M. (2008). Vibrational response of hydrogen-bonded interfacial water is dominated by intramolecular coupling. Physical Review Letters, 100(17), 173901. https://doi.org/10.1103/PhysRevLett.100.173901 [details]
2009
- Tielrooij, K. J., Timmer, R., Bakker, H. J., & Bonn, M. (2009). Water als ultrasnelle achtbaan voor protonen. Nederlands Tijdschrift voor Natuurkunde, 75(9), 329-331. [details]
Prize / grant
- Bakker, H. J. (2016). ERC Advanced Grant.
2017
- Groot, C. C. M. (2017). Dynamics of water interacting with biomolecules. [Thesis, externally prepared, Universiteit van Amsterdam]. [details]
- Selig, O. (2017). Ultrasensitive nonlinear vibrational spectroscopy of complex molecular systems. [Thesis, externally prepared, Universiteit van Amsterdam]. [details]
This list of publications is extracted from the UvA-Current Research Information System. Questions? Ask the library or the Pure staff of your faculty / institute. Log in to Pure to edit your publications. Log in to Personal Page Publication Selection tool to manage the visibility of your publications on this list. -
Ancillary activities
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AMOLF voltijds
Groepsleider en afdelingshoofd
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AMOLF voltijds
Korotkevich, A. A., Sofronov, O. O., Lugier, O., Sengupta, S., Tanase, S., & Bakker, H. J. (2022). Direct Probing of Vibrational Interactions in UiO-66 Polycrystalline Membranes with Femtosecond Two-Dimensional Infrared Spectroscopy. Journal of Physical Chemistry Letters, 13(42), 9793-9800.